Archive | Dr. Sohrab Shah

JointSNVMix paper published: a statistical model for somatic point mutation detection

Posted by admin on 28. Jan, 2012 in Andrew Roth, Dr. Sohrab Shah, JointSNVMix, Publications, Research 0 comments

Andrew Roth, Ryan Morin, Jiarui Ding, Anamaria Crisan, Gavin Ha, Ryan Giuliany, Ali Bashashati, Martin Hirst, Gulisa Turashvili, Arusha Oloumi, Marco A. Marra, Samuel Aparicio and Sohrab P. Shah. JointSNVMix : A Probabilistic Model For Accurate Detection Of Somatic Mutations In Normal/Tumour Paired Next Generation Sequencing Data. Bioinformatics. 2012 doi: 10.1093/bioinformatics/bts053 SOFTWARE

MutationSeq paper on feature based classifiers for somatic mutation detection published

Posted by admin on 15. Nov, 2011 in Dr. Sohrab Shah, Jiarui Ding, Publications, Research, Software 0 comments

Jiarui Ding; Ali Bashashati; Andrew Roth; Arusha Oloumi; Kane Tse; Thomas Zeng; Gholamreza Haffari; Martin Hirst; Marco A. Marra; Anne Condon; Samuel Aparicio; Sohrab P. Shah. “Feature based classifiers for somatic mutation detection in tumour-normal paired sequencing data.” Bioinformatics 2011; doi: 10.1093/bioinformatics/btr629 [PDF] [SOFTWARE]